Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
XDD1_0847 | XDD1_0848 | XDD1_0847 | XDD1_0848 | Similar to aminotransferases. | Uncharacterized Na(+)/H(+) antiporter HI_1107. | 0.796 |
XDD1_0847 | XDD1_0851 | XDD1_0847 | XDD1_0851 | Similar to aminotransferases. | Similarities with LuxR family transcriptional regulator. | 0.424 |
XDD1_0847 | galR | XDD1_0847 | XDD1_0849 | Similar to aminotransferases. | HTH-type transcriptional regulator galR. | 0.648 |
XDD1_0848 | XDD1_0847 | XDD1_0848 | XDD1_0847 | Uncharacterized Na(+)/H(+) antiporter HI_1107. | Similar to aminotransferases. | 0.796 |
XDD1_0848 | XDD1_0851 | XDD1_0848 | XDD1_0851 | Uncharacterized Na(+)/H(+) antiporter HI_1107. | Similarities with LuxR family transcriptional regulator. | 0.444 |
XDD1_0848 | arcB | XDD1_0848 | XDD1_3503 | Uncharacterized Na(+)/H(+) antiporter HI_1107. | Aerobic respiration control sensor protein ArcB. | 0.411 |
XDD1_0848 | galR | XDD1_0848 | XDD1_0849 | Uncharacterized Na(+)/H(+) antiporter HI_1107. | HTH-type transcriptional regulator galR. | 0.663 |
XDD1_0848 | yfbQ | XDD1_0848 | XDD1_2597 | Uncharacterized Na(+)/H(+) antiporter HI_1107. | Uncharacterized aminotransferase yfbQ. | 0.665 |
XDD1_0851 | XDD1_0847 | XDD1_0851 | XDD1_0847 | Similarities with LuxR family transcriptional regulator. | Similar to aminotransferases. | 0.424 |
XDD1_0851 | XDD1_0848 | XDD1_0851 | XDD1_0848 | Similarities with LuxR family transcriptional regulator. | Uncharacterized Na(+)/H(+) antiporter HI_1107. | 0.444 |
XDD1_0851 | arcB | XDD1_0851 | XDD1_3503 | Similarities with LuxR family transcriptional regulator. | Aerobic respiration control sensor protein ArcB. | 0.775 |
XDD1_0851 | galR | XDD1_0851 | XDD1_0849 | Similarities with LuxR family transcriptional regulator. | HTH-type transcriptional regulator galR. | 0.514 |
arcB | XDD1_0848 | XDD1_3503 | XDD1_0848 | Aerobic respiration control sensor protein ArcB. | Uncharacterized Na(+)/H(+) antiporter HI_1107. | 0.411 |
arcB | XDD1_0851 | XDD1_3503 | XDD1_0851 | Aerobic respiration control sensor protein ArcB. | Similarities with LuxR family transcriptional regulator. | 0.775 |
galR | XDD1_0847 | XDD1_0849 | XDD1_0847 | HTH-type transcriptional regulator galR. | Similar to aminotransferases. | 0.648 |
galR | XDD1_0848 | XDD1_0849 | XDD1_0848 | HTH-type transcriptional regulator galR. | Uncharacterized Na(+)/H(+) antiporter HI_1107. | 0.663 |
galR | XDD1_0851 | XDD1_0849 | XDD1_0851 | HTH-type transcriptional regulator galR. | Similarities with LuxR family transcriptional regulator. | 0.514 |
yfbQ | XDD1_0848 | XDD1_2597 | XDD1_0848 | Uncharacterized aminotransferase yfbQ. | Uncharacterized Na(+)/H(+) antiporter HI_1107. | 0.665 |