STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XDD1_1237Ferric enterobactin binding periplasmic protein FepB; Function of strongly homologous gene; transporter. (368 aa)    
Predicted Functional Partners:
fepC
Ferric enterobactin transport protein (ABC superfamily, atp_bind); Function of strongly homologous gene; transporter.
 
 
 0.977
fepD
Ferric enterobactin transport protein (ABC superfamily, membrane); Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.957
XDD1_1240
Ferric enterobactin transport system permease protein FepG; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.927
cbrD
Achromobactin transport ATP-binding protein CbrD.
 
 
 0.907
cbrB
Achromobactin transport system permease protein CbrB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.830
XDD1_1236
FhuE receptor (Outer-membrane receptor for ferric iron uptake); Function of strongly homologous gene; receptor.
  
  
 0.803
cbrC
Achromobactin transport system permease protein CbrC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.801
hmuU
Hemin transport system permease protein hmuU; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.695
XDD1_2518
Putative ferric enterobactin transport protein (ABC superfamily, atp_bind); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.695
XDD1_2519
Iron complex transport system permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.682
Your Current Organism:
Xenorhabdus doucetiae
NCBI taxonomy Id: 351671
Other names: CIP 109074, DSM 17909, X. doucetiae, Xenorhabdus doucetiae Tailliez et al. 2006, Xenorhabdus sp. FRG30, strain FRM16
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