Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
XDD1_1237Ferric enterobactin binding periplasmic protein FepB; Function of strongly homologous gene; transporter. (368 aa)    
Predicted Functional Partners:
fepC
Ferric enterobactin transport protein (ABC superfamily, atp_bind); Function of strongly homologous gene; transporter.
 
 0.994
fepD
Ferric enterobactin transport protein (ABC superfamily, membrane); Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.987
XDD1_1240
Ferric enterobactin transport system permease protein FepG; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.984
cbrD
Achromobactin transport ATP-binding protein CbrD.
 
 
 0.892
XDD1_1236
FhuE receptor (Outer-membrane receptor for ferric iron uptake); Function of strongly homologous gene; receptor.
     
 0.804
cbrB
Achromobactin transport system permease protein CbrB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.769
cbrC
Achromobactin transport system permease protein CbrC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.730
XDD1_1140
Homologs of previously reported genes of unknown function.
  
  
 0.657
XDD1_2518
Putative ferric enterobactin transport protein (ABC superfamily, atp_bind); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.645
cbrA
Achromobactin-binding periplasmic protein.
     0.615
Your Current Organism:
Xenorhabdus doucetiae
NCBI taxonomy Id: 351671
Other names: CIP 109074, DSM 17909, X. doucetiae, Xenorhabdus doucetiae Tailliez et al. 2006, Xenorhabdus sp. FRG30, strain FRM16
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