Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
XDD1_1908Putative Phenylalanine racemase (ATP-hydrolyzing) (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (2079 aa)    
Predicted Functional Partners:
XDD1_2286
Putative Ornithine racemase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
0.996
phzD
Putative isochorismatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.991
XDD1_2281
Putative Ornithine racemase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
0.989
XDD1_1907
Putative Non-ribosomal peptide synthase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
0.982
XDD1_2715
Polyketide synthase modules and related protein; Function of strongly homologous gene; enzyme.
 
 
 0.982
XDD1_1906
Putative Phenylalanine racemase (ATP-hydrolyzing); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
0.981
xcnF
Polyketide synthase involved in xenocoumacin synthesis; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.977
xcnL
Polyketide synthase involved in xenocoumacin synthesis; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.969
XDD1_2711
Putative polyketide synthase type I; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
0.965
nuoC
NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 0.959
Your Current Organism:
Xenorhabdus doucetiae
NCBI taxonomy Id: 351671
Other names: CIP 109074, DSM 17909, X. doucetiae, Xenorhabdus doucetiae Tailliez et al. 2006, Xenorhabdus sp. FRG30, strain FRM16
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