STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XDD1_2041Conserved hypothetical protein, probable component of SST VI cluster; Homologs of previously reported genes of unknown function. (448 aa)    
Predicted Functional Partners:
XDD1_2040
Conserved hypothetical protein with OmpA/MotB domains (probable component of SST VI cluster); Homologs of previously reported genes of unknown function.
 
  
 0.961
XDD1_2039
Conserved hypothetical protein (ImcF-like domain protein precursor of SST VI cluster); Homologs of previously reported genes of unknown function.
 
  
 0.951
XDD1_2037
Conserved hypothetical protein (probable component of SST VI cluster); Homologs of previously reported genes of unknown function.
 
  
 0.938
XDD1_2049
Conserved hypothetical protein (Vgr family protein, that may be secreted via SST VI system); Homologs of previously reported genes of unknown function.
 
    0.919
XDD1_2042
Homologs of previously reported genes of unknown function.
 
  
 0.918
XDD1_1894
Conserved hypothetical protein with OmpA/MotB domains (probable component of SST VI cluster); Homologs of previously reported genes of unknown function.
 
  
 0.917
XDD1_2036
Conserved hypothetical protein (probable component of SST VI cluster); Homologs of previously reported genes of unknown function.
 
  
 0.897
XDD1_2038
Conserved hypothetical protein with ImpA domain(probable component of SST VI cluster); Homologs of previously reported genes of unknown function.
 
  
 0.893
XDD1_1891
Conserved hypothetical protein (probable component of SST VI cluster); Homologs of previously reported genes of unknown function.
 
  
 0.887
XDD1_2032
Conserved hypothetical protein (probable component of SST VI cluster); Homologs of previously reported genes of unknown function.
 
 
 0.870
Your Current Organism:
Xenorhabdus doucetiae
NCBI taxonomy Id: 351671
Other names: CIP 109074, DSM 17909, X. doucetiae, Xenorhabdus doucetiae Tailliez et al. 2006, Xenorhabdus sp. FRG30, strain FRM16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.