XDD1_2460 protein (Xenorhabdus doucetiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

XDD1_2460

Homologs of previously reported genes of unknown function. (114 aa)

Predicted Functional Partners:

W

0.842

FI

0.826

XDD1_2901

0.772

XDD1_2840

0.746

XDD1_3428

0.746

XDD1_1419

0.525

V-2

0.498

fbaB

0.483

XDD1_3484

0.480

XDD1_1756

0.474

Your Current Organism:

Xenorhabdus doucetiae

NCBI taxonomy Id: 351671
Other names: CIP 109074, DSM 17909, X. doucetiae, Xenorhabdus doucetiae Tailliez et al. 2006, Xenorhabdus sp. FRG30, strain FRM16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FI	V-2	XDD1_2907	XDD1_2916	Major tail sheath protein.	Baseplate assembly protein V.	0.970
FI	W	XDD1_2907	XDD1_2915	Major tail sheath protein.	Baseplate assembly protein W.	0.995
FI	XDD1_2460	XDD1_2907	XDD1_2460	Major tail sheath protein.	Homologs of previously reported genes of unknown function.	0.826
FI	XDD1_2840	XDD1_2907	XDD1_2840	Major tail sheath protein.	Uncharacterized 44.2 kDa protein in lys 3'region.	0.798
FI	XDD1_2901	XDD1_2907	XDD1_2901	Major tail sheath protein.	Putative phage protein (D protein) (Modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	0.993
FI	XDD1_3428	XDD1_2907	XDD1_3428	Major tail sheath protein.	Uncharacterized 44.2 kDa protein in lys 3'region.	0.798
V-2	FI	XDD1_2916	XDD1_2907	Baseplate assembly protein V.	Major tail sheath protein.	0.970
V-2	W	XDD1_2916	XDD1_2915	Baseplate assembly protein V.	Baseplate assembly protein W.	0.995
V-2	XDD1_2460	XDD1_2916	XDD1_2460	Baseplate assembly protein V.	Homologs of previously reported genes of unknown function.	0.498
V-2	XDD1_2901	XDD1_2916	XDD1_2901	Baseplate assembly protein V.	Putative phage protein (D protein) (Modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	0.969
W	FI	XDD1_2915	XDD1_2907	Baseplate assembly protein W.	Major tail sheath protein.	0.995
W	V-2	XDD1_2915	XDD1_2916	Baseplate assembly protein W.	Baseplate assembly protein V.	0.995
W	XDD1_2460	XDD1_2915	XDD1_2460	Baseplate assembly protein W.	Homologs of previously reported genes of unknown function.	0.842
W	XDD1_2840	XDD1_2915	XDD1_2840	Baseplate assembly protein W.	Uncharacterized 44.2 kDa protein in lys 3'region.	0.802
W	XDD1_2901	XDD1_2915	XDD1_2901	Baseplate assembly protein W.	Putative phage protein (D protein) (Modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	0.991
W	XDD1_3428	XDD1_2915	XDD1_3428	Baseplate assembly protein W.	Uncharacterized 44.2 kDa protein in lys 3'region.	0.802
XDD1_1419	XDD1_2460	XDD1_1419	XDD1_2460	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.525
XDD1_1756	XDD1_2460	XDD1_1756	XDD1_2460	Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the fructosamine kinase family.	Homologs of previously reported genes of unknown function.	0.474
XDD1_2460	FI	XDD1_2460	XDD1_2907	Homologs of previously reported genes of unknown function.	Major tail sheath protein.	0.826
XDD1_2460	V-2	XDD1_2460	XDD1_2916	Homologs of previously reported genes of unknown function.	Baseplate assembly protein V.	0.498