Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
XDD1_2986 | XDD1_2990 | XDD1_2986 | XDD1_2990 | Homologs of previously reported genes of unknown function. | Homologs of previously reported genes of unknown function; Belongs to the UPF0231 family. | 0.409 |
XDD1_2986 | argO | XDD1_2986 | XDD1_2988 | Homologs of previously reported genes of unknown function. | Arginine exporter protein ArgO; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine; Belongs to the LysE/ArgO transporter (TC 2.A.75) family. | 0.580 |
XDD1_2986 | mscS | XDD1_2986 | XDD1_2989 | Homologs of previously reported genes of unknown function. | Small-conductance mechanosensitive channel. | 0.459 |
XDD1_2990 | XDD1_2986 | XDD1_2990 | XDD1_2986 | Homologs of previously reported genes of unknown function; Belongs to the UPF0231 family. | Homologs of previously reported genes of unknown function. | 0.409 |
XDD1_2990 | argO | XDD1_2990 | XDD1_2988 | Homologs of previously reported genes of unknown function; Belongs to the UPF0231 family. | Arginine exporter protein ArgO; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine; Belongs to the LysE/ArgO transporter (TC 2.A.75) family. | 0.432 |
XDD1_2990 | mscS | XDD1_2990 | XDD1_2989 | Homologs of previously reported genes of unknown function; Belongs to the UPF0231 family. | Small-conductance mechanosensitive channel. | 0.572 |
argO | XDD1_2986 | XDD1_2988 | XDD1_2986 | Arginine exporter protein ArgO; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine; Belongs to the LysE/ArgO transporter (TC 2.A.75) family. | Homologs of previously reported genes of unknown function. | 0.580 |
argO | XDD1_2990 | XDD1_2988 | XDD1_2990 | Arginine exporter protein ArgO; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine; Belongs to the LysE/ArgO transporter (TC 2.A.75) family. | Homologs of previously reported genes of unknown function; Belongs to the UPF0231 family. | 0.432 |
argO | iciA | XDD1_2988 | XDD1_2985 | Arginine exporter protein ArgO; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine; Belongs to the LysE/ArgO transporter (TC 2.A.75) family. | Chromosome initiation inhibitor; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family. | 0.828 |
argO | mscS | XDD1_2988 | XDD1_2989 | Arginine exporter protein ArgO; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine; Belongs to the LysE/ArgO transporter (TC 2.A.75) family. | Small-conductance mechanosensitive channel. | 0.503 |
iciA | argO | XDD1_2985 | XDD1_2988 | Chromosome initiation inhibitor; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family. | Arginine exporter protein ArgO; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine; Belongs to the LysE/ArgO transporter (TC 2.A.75) family. | 0.828 |
mscS | XDD1_2986 | XDD1_2989 | XDD1_2986 | Small-conductance mechanosensitive channel. | Homologs of previously reported genes of unknown function. | 0.459 |
mscS | XDD1_2990 | XDD1_2989 | XDD1_2990 | Small-conductance mechanosensitive channel. | Homologs of previously reported genes of unknown function; Belongs to the UPF0231 family. | 0.572 |
mscS | argO | XDD1_2989 | XDD1_2988 | Small-conductance mechanosensitive channel. | Arginine exporter protein ArgO; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine; Belongs to the LysE/ArgO transporter (TC 2.A.75) family. | 0.503 |