Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
XDD1_1211 | XDD1_2127 | XDD1_1211 | XDD1_2127 | Argininosuccinate lyase. | Glycine amidinotransferase, mitochondrial (fragment). | 0.800 |
XDD1_1211 | adiA | XDD1_1211 | XDD1_2275 | Argininosuccinate lyase. | Biodegradative arginine decarboxylase. | 0.811 |
XDD1_1211 | argH | XDD1_1211 | XDD1_0219 | Argininosuccinate lyase. | Argininosuccinate lyase. | 0.928 |
XDD1_1211 | astA | XDD1_1211 | XDD1_2671 | Argininosuccinate lyase. | Arginine N-succinyltransferase. | 0.803 |
XDD1_1211 | speA | XDD1_1211 | XDD1_3139 | Argininosuccinate lyase. | Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.822 |
XDD1_2127 | XDD1_1211 | XDD1_2127 | XDD1_1211 | Glycine amidinotransferase, mitochondrial (fragment). | Argininosuccinate lyase. | 0.800 |
XDD1_2127 | adiA | XDD1_2127 | XDD1_2275 | Glycine amidinotransferase, mitochondrial (fragment). | Biodegradative arginine decarboxylase. | 0.902 |
XDD1_2127 | argH | XDD1_2127 | XDD1_0219 | Glycine amidinotransferase, mitochondrial (fragment). | Argininosuccinate lyase. | 0.823 |
XDD1_2127 | astA | XDD1_2127 | XDD1_2671 | Glycine amidinotransferase, mitochondrial (fragment). | Arginine N-succinyltransferase. | 0.900 |
XDD1_2127 | speA | XDD1_2127 | XDD1_3139 | Glycine amidinotransferase, mitochondrial (fragment). | Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.908 |
adiA | XDD1_1211 | XDD1_2275 | XDD1_1211 | Biodegradative arginine decarboxylase. | Argininosuccinate lyase. | 0.811 |
adiA | XDD1_2127 | XDD1_2275 | XDD1_2127 | Biodegradative arginine decarboxylase. | Glycine amidinotransferase, mitochondrial (fragment). | 0.902 |
adiA | argH | XDD1_2275 | XDD1_0219 | Biodegradative arginine decarboxylase. | Argininosuccinate lyase. | 0.811 |
adiA | astA | XDD1_2275 | XDD1_2671 | Biodegradative arginine decarboxylase. | Arginine N-succinyltransferase. | 0.907 |
adiA | speA | XDD1_2275 | XDD1_3139 | Biodegradative arginine decarboxylase. | Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.915 |
adiA | speB | XDD1_2275 | XDD1_3140 | Biodegradative arginine decarboxylase. | Agmatinase; Catalyzes the formation of putrescine from agmatine. Belongs to the arginase family. Agmatinase subfamily. | 0.918 |
argH | XDD1_1211 | XDD1_0219 | XDD1_1211 | Argininosuccinate lyase. | Argininosuccinate lyase. | 0.928 |
argH | XDD1_2127 | XDD1_0219 | XDD1_2127 | Argininosuccinate lyase. | Glycine amidinotransferase, mitochondrial (fragment). | 0.823 |
argH | adiA | XDD1_0219 | XDD1_2275 | Argininosuccinate lyase. | Biodegradative arginine decarboxylase. | 0.811 |
argH | astA | XDD1_0219 | XDD1_2671 | Argininosuccinate lyase. | Arginine N-succinyltransferase. | 0.803 |
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