STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XDD1_3810Homologs of previously reported genes of unknown function. (594 aa)    
Predicted Functional Partners:
smp
Protein smp.
  
     0.771
bhsA-2
Multiple stress resistance protein BhsA.
  
     0.768
phoQ
Two-component system, OmpR family, sensor histidine kinase PhoQ; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
     0.754
bhsA
Multiple stress resistance protein BhsA.
  
     0.749
holD
DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.
  
     0.743
fliT
Flagellar protein fliT.
  
     0.740
dsbA
Thiol:disulfide interchange protein DsbA.
 
     0.738
XDD1_1538
Homologs of previously reported genes of unknown function.
  
     0.736
uspB
Universal stress protein B.
  
     0.731
XDD1_0895
Homologs of previously reported genes of unknown function.
  
     0.729
Your Current Organism:
Xenorhabdus doucetiae
NCBI taxonomy Id: 351671
Other names: CIP 109074, DSM 17909, X. doucetiae, Xenorhabdus doucetiae Tailliez et al. 2006, Xenorhabdus sp. FRG30, strain FRM16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.