STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XDD1_3851Putative amino acid-binding protein (ABC superfamily, peri_bind); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the bacterial solute-binding protein 3 family. (281 aa)    
Predicted Functional Partners:
XDD1_3849
Putative high-affinity glutamine transport protein (ABC superfamily, membrane); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.953
XDD1_3850
Putative glutamate/aspartate transport protein (ABC superfamily, membrane); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.918
tcyB
L-cystine transport system permease protein tcyB.
 
 0.836
gltL
Glutamate/aspartate transport ATP-binding protein GltL.
 
 0.831
gltK
Glutamate/aspartate transport system permease protein gltK.
 
 0.831
gltJ
Glutamate/aspartate transport system permease protein gltJ.
 
 
 0.830
artQ
Arginine ABC transporter permease protein ArtQ.
 
 0.786
artM
Arginine ABC transporter permease protein ArtM.
 
  
 0.762
XDD1_0521
Putative amino-acid ABC transporter ATP-binding protein HI_1078; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.748
artP
Arginine transport ATP-binding protein ArtP.
  
 0.693
Your Current Organism:
Xenorhabdus doucetiae
NCBI taxonomy Id: 351671
Other names: CIP 109074, DSM 17909, X. doucetiae, Xenorhabdus doucetiae Tailliez et al. 2006, Xenorhabdus sp. FRG30, strain FRM16
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