STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU17333.130S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology. (89 aa)    
Predicted Functional Partners:
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
rpsF
30S ribosomal protein S6; Binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.999
KLU15898.1
30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
KLU15801.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
KLU14882.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.999
KLU14883.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.999
KLU14115.1
30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
KLU14116.1
30S ribosomal protein S11; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
KLU14117.1
30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
KLU14122.1
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.999
Your Current Organism:
Xenorhabdus griffiniae
NCBI taxonomy Id: 351672
Other names: CIP 109073, DSM 17911, X. griffiniae, Xenorhabdus griffiniae Tailliez et al. 2006, Xenorhabdus sp. ID10, strain ID10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.