STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU17272.1Intramembrane serine protease GlpG; Protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)    
Predicted Functional Partners:
KLU14954.1
Preprotein translocase subunit TatA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.897
KLU14953.1
Membrane translocation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.872
KLU17381.1
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.852
amiC
N-acetylmuramoyl-L-alanine amidase; Hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.852
glpE
Belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.756
KLU16834.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.729
hflB
Inner membrane metalloprotease; may be involved in degradation of aberrant cytoplasmic and membrane proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.726
KLU17375.1
Cell division protein FtsH; With HflK inhibits proteolysis of lambda cII protein by FtsH; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.721
KLU17376.1
Cell division protein FtsH; With HflC inhibits proteolysis of lambda cII protein by FtsH; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.721
KLU16428.1
5-formyltetrahydrofolate cyclo-ligase; ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.690
Your Current Organism:
Xenorhabdus griffiniae
NCBI taxonomy Id: 351672
Other names: CIP 109073, DSM 17911, X. griffiniae, Xenorhabdus griffiniae Tailliez et al. 2006, Xenorhabdus sp. ID10, strain ID10
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