STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU16035.1Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)    
Predicted Functional Partners:
KLU16040.1
Enhances serine sensitivity; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.891
hmsH
In Yersinia this protein is important for biofilm formation and hemin adsorption; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.775
KLU15400.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.741
KLU15034.1
Peptide ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.741
KLU16363.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.718
KLU16404.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.718
znuB
High-affinity zinc transporter membrane component; Involved in transport of zinc(II) with ZnuA and C; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.713
KLU14554.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.713
KLU14555.1
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.713
KLU16037.1
Nucleoside diphosphate kinase; Catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.700
Your Current Organism:
Xenorhabdus griffiniae
NCBI taxonomy Id: 351672
Other names: CIP 109073, DSM 17911, X. griffiniae, Xenorhabdus griffiniae Tailliez et al. 2006, Xenorhabdus sp. ID10, strain ID10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.