STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU15420.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (647 aa)    
Predicted Functional Partners:
KLU16329.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.939
KLU14196.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.938
KLU14677.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.936
KLU15383.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.875
KLU15384.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.807
KLU15385.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.774
KLU15388.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.761
KLU16224.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.749
KLU14370.1
Serine 3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.749
KLU15179.1
Peptidoglycan-associated outer membrane lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.747
Your Current Organism:
Xenorhabdus griffiniae
NCBI taxonomy Id: 351672
Other names: CIP 109073, DSM 17911, X. griffiniae, Xenorhabdus griffiniae Tailliez et al. 2006, Xenorhabdus sp. ID10, strain ID10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.