STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU14092.14-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase; Catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)    
Predicted Functional Partners:
arnT
Catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
KLU14094.1
4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.989
KLU14091.1
UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Bifunctional polymyxin resistance arnA protein; catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose; active in certain mutant strains; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.985
KLU14090.1
Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.982
KLU14095.1
4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.959
KLU14089.1
UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase; Catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.840
KLU15629.1
N-glycosyltransferase; Predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.830
KLU16001.1
4-amino-4-deoxy-L-arabinose-phospho-UDP flippase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.800
KLU17032.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.666
KLU17295.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.660
Your Current Organism:
Xenorhabdus griffiniae
NCBI taxonomy Id: 351672
Other names: CIP 109073, DSM 17911, X. griffiniae, Xenorhabdus griffiniae Tailliez et al. 2006, Xenorhabdus sp. ID10, strain ID10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.