STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ39964.1Filamentous hemagglutinin. (2435 aa)    
Predicted Functional Partners:
SFJ39904.1
Hemolysin activation/secretion protein.
 
 0.957
SFI37154.1
Hemolysin activation/secretion protein.
 
 0.828
SFJ47991.1
Hemolysin activation/secretion protein.
 
 0.823
SFJ34514.1
Hemolysin activation/secretion protein.
 
 0.819
SFJ39936.1
Cytolysin-activating lysine-acyltransferase.
 
     0.811
SFJ15911.1
Hemolysin activation/secretion protein.
 
 0.804
SFI68966.1
Subtilase-type serine protease.
  
 
 0.716
SFI90668.1
Subtilase-type serine protease.
  
 
 0.716
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.699
SFI85740.1
Pre-toxin domain with VENN motif-containing protein.
 
     0.693
Your Current Organism:
Xenorhabdus mauleonii
NCBI taxonomy Id: 351675
Other names: CIP 109075, DSM 17908, X. mauleonii, Xenorhabdus mauleonii Tailliez et al. 2006, Xenorhabdus sp. VC01, strain VC01
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