Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI37442.1 | SFI37725.1 | SAMN05421680_10111 | SAMN05421680_10120 | Flagellar hook-associated protein 3 FlgL. | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.972 |
SFI37442.1 | SFI37820.1 | SAMN05421680_10111 | SAMN05421680_10123 | Flagellar hook-associated protein 3 FlgL. | Anti-sigma-28 factor, FlgM family. | 0.905 |
SFI37442.1 | SFJ67251.1 | SAMN05421680_10111 | SAMN05421680_11340 | Flagellar hook-associated protein 3 FlgL. | Flagellum-specific ATP synthase. | 0.892 |
SFI37442.1 | SFJ67584.1 | SAMN05421680_10111 | SAMN05421680_11350 | Flagellar hook-associated protein 3 FlgL. | Flagellar protein FliT. | 0.813 |
SFI37442.1 | SFJ67614.1 | SAMN05421680_10111 | SAMN05421680_11351 | Flagellar hook-associated protein 3 FlgL. | Flagellar protein FliS. | 0.998 |
SFI37442.1 | SFJ67650.1 | SAMN05421680_10111 | SAMN05421680_11352 | Flagellar hook-associated protein 3 FlgL. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.986 |
SFI37442.1 | SFJ67713.1 | SAMN05421680_10111 | SAMN05421680_11354 | Flagellar hook-associated protein 3 FlgL. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.943 |
SFI37442.1 | flgK | SAMN05421680_10111 | SAMN05421680_10112 | Flagellar hook-associated protein 3 FlgL. | Flagellar hook-associated protein 1 FlgK. | 0.994 |
SFI37442.1 | flhA | SAMN05421680_10111 | SAMN05421680_10129 | Flagellar hook-associated protein 3 FlgL. | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.828 |
SFI37442.1 | fliE | SAMN05421680_10111 | SAMN05421680_11344 | Flagellar hook-associated protein 3 FlgL. | Flagellar hook-basal body complex protein FliE. | 0.932 |
SFI37725.1 | SFI37442.1 | SAMN05421680_10120 | SAMN05421680_10111 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar hook-associated protein 3 FlgL. | 0.972 |
SFI37725.1 | SFI37820.1 | SAMN05421680_10120 | SAMN05421680_10123 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Anti-sigma-28 factor, FlgM family. | 0.890 |
SFI37725.1 | SFJ67251.1 | SAMN05421680_10120 | SAMN05421680_11340 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellum-specific ATP synthase. | 0.981 |
SFI37725.1 | SFJ67614.1 | SAMN05421680_10120 | SAMN05421680_11351 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar protein FliS. | 0.980 |
SFI37725.1 | SFJ67650.1 | SAMN05421680_10120 | SAMN05421680_11352 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.956 |
SFI37725.1 | SFJ67713.1 | SAMN05421680_10120 | SAMN05421680_11354 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.956 |
SFI37725.1 | flgK | SAMN05421680_10120 | SAMN05421680_10112 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar hook-associated protein 1 FlgK. | 0.991 |
SFI37725.1 | flhA | SAMN05421680_10120 | SAMN05421680_10129 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.959 |
SFI37725.1 | fliE | SAMN05421680_10120 | SAMN05421680_11344 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar hook-basal body complex protein FliE. | 0.996 |
SFI37820.1 | SFI37442.1 | SAMN05421680_10123 | SAMN05421680_10111 | Anti-sigma-28 factor, FlgM family. | Flagellar hook-associated protein 3 FlgL. | 0.905 |
page 1 of 6