STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ74910.1Hypothetical protein. (346 aa)    
Predicted Functional Partners:
SFJ74941.1
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB.
 
   
 0.793
SFJ90982.1
ADP-heptose:LPS heptosyltransferase.
 
     0.590
SFI37605.1
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
   
   0.520
SFI38374.1
Invasin, domain 3.
  
     0.405
SFI39541.1
Adhesin/invasin.
  
     0.405
SFJ70999.1
Invasin, domain 3.
  
     0.404
Your Current Organism:
Xenorhabdus mauleonii
NCBI taxonomy Id: 351675
Other names: CIP 109075, DSM 17908, X. mauleonii, Xenorhabdus mauleonii Tailliez et al. 2006, Xenorhabdus sp. VC01, strain VC01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.