Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI56067.1 | SFJ05848.1 | SAMN05421680_102110 | SAMN05421680_105132 | Amino acid adenylation domain-containing protein. | Para-aminobenzoate synthetase component 1. | 0.710 |
SFI56067.1 | SFJ33761.1 | SAMN05421680_102110 | SAMN05421680_107178 | Amino acid adenylation domain-containing protein. | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.964 |
SFI56067.1 | SFJ61574.1 | SAMN05421680_102110 | SAMN05421680_1126 | Amino acid adenylation domain-containing protein. | Chorismate mutase. | 0.718 |
SFI56067.1 | SFJ61666.1 | SAMN05421680_102110 | SAMN05421680_1129 | Amino acid adenylation domain-containing protein. | Chorismate mutase. | 0.699 |
SFI56067.1 | SFJ67806.1 | SAMN05421680_102110 | SAMN05421680_11357 | Amino acid adenylation domain-containing protein. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.558 |
SFI56067.1 | SFJ76147.1 | SAMN05421680_102110 | SAMN05421680_11595 | Amino acid adenylation domain-containing protein. | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.964 |
SFI56067.1 | SFJ79298.1 | SAMN05421680_102110 | SAMN05421680_11654 | Amino acid adenylation domain-containing protein. | Aminodeoxychorismate lyase apoprotein. | 0.861 |
SFI56067.1 | edd | SAMN05421680_102110 | SAMN05421680_1368 | Amino acid adenylation domain-containing protein. | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.510 |
SFI56067.1 | ilvD | SAMN05421680_102110 | SAMN05421680_103343 | Amino acid adenylation domain-containing protein. | Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family. | 0.510 |
SFI56067.1 | trpD | SAMN05421680_102110 | SAMN05421680_104221 | Amino acid adenylation domain-containing protein. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.650 |
SFJ05848.1 | SFI56067.1 | SAMN05421680_105132 | SAMN05421680_102110 | Para-aminobenzoate synthetase component 1. | Amino acid adenylation domain-containing protein. | 0.710 |
SFJ05848.1 | SFJ33761.1 | SAMN05421680_105132 | SAMN05421680_107178 | Para-aminobenzoate synthetase component 1. | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.406 |
SFJ05848.1 | SFJ61574.1 | SAMN05421680_105132 | SAMN05421680_1126 | Para-aminobenzoate synthetase component 1. | Chorismate mutase. | 0.872 |
SFJ05848.1 | SFJ61666.1 | SAMN05421680_105132 | SAMN05421680_1129 | Para-aminobenzoate synthetase component 1. | Chorismate mutase. | 0.851 |
SFJ05848.1 | SFJ67806.1 | SAMN05421680_105132 | SAMN05421680_11357 | Para-aminobenzoate synthetase component 1. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.444 |
SFJ05848.1 | SFJ76147.1 | SAMN05421680_105132 | SAMN05421680_11595 | Para-aminobenzoate synthetase component 1. | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.406 |
SFJ05848.1 | SFJ79298.1 | SAMN05421680_105132 | SAMN05421680_11654 | Para-aminobenzoate synthetase component 1. | Aminodeoxychorismate lyase apoprotein. | 0.865 |
SFJ05848.1 | trpD | SAMN05421680_105132 | SAMN05421680_104221 | Para-aminobenzoate synthetase component 1. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.999 |
SFJ33761.1 | SFI56067.1 | SAMN05421680_107178 | SAMN05421680_102110 | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Amino acid adenylation domain-containing protein. | 0.964 |
SFJ33761.1 | SFJ05848.1 | SAMN05421680_107178 | SAMN05421680_105132 | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Para-aminobenzoate synthetase component 1. | 0.406 |
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