STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK12309.1Regulatory protein, luxR family. (231 aa)    
Predicted Functional Partners:
SFJ92365.1
Two-component system, NarL family, sensor histidine kinase BarA.
  
 0.997
SFJ42023.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.967
rcsC
Two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.
  
 0.900
SFJ31226.1
PAS fold-containing protein.
  
0.838
rcsD
Two-component system, NarL family, sensor histidine kinase RcsD; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.
   
 0.828
SFI60841.1
SseB protein C-terminal domain-containing protein.
    
 0.538
SFK12277.1
Hypothetical protein.
       0.528
SFI53357.1
Poly acetylglucosamine porin.
    
  0.496
SFJ37403.1
Two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX.
  
 0.480
SFK12247.1
Cro/C1-type HTH DNA-binding domain-containing protein.
   
  0.473
Your Current Organism:
Xenorhabdus mauleonii
NCBI taxonomy Id: 351675
Other names: CIP 109075, DSM 17908, X. mauleonii, Xenorhabdus mauleonii Tailliez et al. 2006, Xenorhabdus sp. VC01, strain VC01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.