STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK13292.1Phage integrase family protein. (247 aa)    
Predicted Functional Partners:
SFI40545.1
Phage integrase, N-terminal SAM-like domain; Belongs to the 'phage' integrase family.
 
     0.976
SFK13317.1
Protein of unknown function.
     0.893
SFK26125.1
Phage integrase family protein; Belongs to the 'phage' integrase family.
  
     0.774
SFI40031.1
Protein of unknown function.
  
     0.772
SFK20214.1
Protein of unknown function; Belongs to the 'phage' integrase family.
  
     0.771
SFJ93741.1
Integrase; Belongs to the 'phage' integrase family.
  
     0.770
SFK13174.1
Putative DNA primase/helicase.
 
    0.610
SFI40415.1
Putative DNA primase/helicase.
 
     0.535
SFK14015.1
Putative DNA primase/helicase.
  
    0.503
SFJ79941.1
Protein of unknown function.
  
     0.500
Your Current Organism:
Xenorhabdus mauleonii
NCBI taxonomy Id: 351675
Other names: CIP 109075, DSM 17908, X. mauleonii, Xenorhabdus mauleonii Tailliez et al. 2006, Xenorhabdus sp. VC01, strain VC01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.