STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A9255_00485Phage baseplate protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa)    
Predicted Functional Partners:
AOM40494.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.798
AOM39951.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    0.797
AOM39222.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.789
AOM40484.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.789
AOM40493.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.789
AOM40487.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.786
AOM39221.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.785
AOM39954.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.785
AOM40485.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.785
A9255_04830
Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.784
Your Current Organism:
Xenorhabdus hominickii
NCBI taxonomy Id: 351679
Other names: CIP 109072, DSM 17903, X. hominickii, Xenorhabdus hominickii Taillez et al. 2006, Xenorhabdus sp. KE01, Xenorhabdus sp. KR01, Xenorhabdus sp. KR05, strain KE01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.