Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A9255_09985 | AOM41042.1 | A9255_09985 | A9255_10930 | TetR family transcriptional regulator; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.569 |
A9255_09985 | AOM42572.1 | A9255_09985 | A9255_19690 | TetR family transcriptional regulator; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.408 |
AOM41042.1 | A9255_09985 | A9255_10930 | A9255_09985 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | TetR family transcriptional regulator; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.569 |
AOM41042.1 | AOM42572.1 | A9255_10930 | A9255_19690 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.446 |
AOM42572.1 | A9255_09985 | A9255_19690 | A9255_09985 | Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.408 |
AOM42572.1 | AOM41042.1 | A9255_19690 | A9255_10930 | Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.446 |