STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOM42227.1Phage capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)    
Predicted Functional Partners:
AOM42228.1
Phage major capsid protein, P2 family; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.990
AOM42229.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.990
AOM42230.1
Head completion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.985
A9255_07275
Peptidase C39; Internal stop; incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.972
AOM39151.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.969
AOM39161.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.968
AOM39158.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.967
AOM39148.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.965
AOM39153.1
Phage tail protein I; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.949
AOM42226.1
Terminase; gpP; P protein; capsid packaging; P protein is probably the ATPase subunit of the terminase complex, which directs cos cleavage of closed monomeric dsDNA circles into linear genomes with 19 nt cohesive ssDNA ends; Q, P and M proteins are needed to package DNA into capsid proheads and conversion into mature capsids; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.890
Your Current Organism:
Xenorhabdus hominickii
NCBI taxonomy Id: 351679
Other names: CIP 109072, DSM 17903, X. hominickii, Xenorhabdus hominickii Taillez et al. 2006, Xenorhabdus sp. KE01, Xenorhabdus sp. KR01, Xenorhabdus sp. KR05, strain KE01
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