STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOM42683.1Addiction module antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)    
Predicted Functional Partners:
AOM42682.1
Addiction module antitoxin RelB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.956
AOM42681.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.547
vapC
Twitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
     0.455
AOM39463.1
Addiction module antidote protein, HigA family; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.410
AOM42679.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.400
Your Current Organism:
Xenorhabdus hominickii
NCBI taxonomy Id: 351679
Other names: CIP 109072, DSM 17903, X. hominickii, Xenorhabdus hominickii Taillez et al. 2006, Xenorhabdus sp. KE01, Xenorhabdus sp. KR01, Xenorhabdus sp. KR05, strain KE01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.