Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFB90301.1 | EFB90302.1 | HMPREF7215_1213 | HMPREF7215_1214 | ABC transporter, substrate-binding protein, family 5; Identified by match to protein family HMM PF00496. | Demethylmenaquinone methyltransferase; Identified by match to protein family HMM PF03737. | 0.559 |
| EFB90301.1 | EFB90303.1 | HMPREF7215_1213 | HMPREF7215_1215 | ABC transporter, substrate-binding protein, family 5; Identified by match to protein family HMM PF00496. | Hydrolase, carbon-nitrogen family; Identified by match to protein family HMM PF00795. | 0.559 |
| EFB90301.1 | EFB90304.1 | HMPREF7215_1213 | HMPREF7215_1216 | ABC transporter, substrate-binding protein, family 5; Identified by match to protein family HMM PF00496. | Creatininase; Identified by match to protein family HMM PF02633. | 0.472 |
| EFB90301.1 | EFB90305.1 | HMPREF7215_1213 | HMPREF7215_1217 | ABC transporter, substrate-binding protein, family 5; Identified by match to protein family HMM PF00496. | Hypothetical protein; Identified by glimmer; putative. | 0.472 |
| EFB90302.1 | EFB90301.1 | HMPREF7215_1214 | HMPREF7215_1213 | Demethylmenaquinone methyltransferase; Identified by match to protein family HMM PF03737. | ABC transporter, substrate-binding protein, family 5; Identified by match to protein family HMM PF00496. | 0.559 |
| EFB90302.1 | EFB90303.1 | HMPREF7215_1214 | HMPREF7215_1215 | Demethylmenaquinone methyltransferase; Identified by match to protein family HMM PF03737. | Hydrolase, carbon-nitrogen family; Identified by match to protein family HMM PF00795. | 0.773 |
| EFB90302.1 | EFB90304.1 | HMPREF7215_1214 | HMPREF7215_1216 | Demethylmenaquinone methyltransferase; Identified by match to protein family HMM PF03737. | Creatininase; Identified by match to protein family HMM PF02633. | 0.642 |
| EFB90302.1 | EFB90305.1 | HMPREF7215_1214 | HMPREF7215_1217 | Demethylmenaquinone methyltransferase; Identified by match to protein family HMM PF03737. | Hypothetical protein; Identified by glimmer; putative. | 0.642 |
| EFB90302.1 | EFB90306.1 | HMPREF7215_1214 | HMPREF7215_1218 | Demethylmenaquinone methyltransferase; Identified by match to protein family HMM PF03737. | Glycine dehydrogenase subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.454 |
| EFB90302.1 | EFB90307.1 | HMPREF7215_1214 | HMPREF7215_1219 | Demethylmenaquinone methyltransferase; Identified by match to protein family HMM PF03737. | Putative glycine dehydrogenase subunit 2. | 0.454 |
| EFB90303.1 | EFB90301.1 | HMPREF7215_1215 | HMPREF7215_1213 | Hydrolase, carbon-nitrogen family; Identified by match to protein family HMM PF00795. | ABC transporter, substrate-binding protein, family 5; Identified by match to protein family HMM PF00496. | 0.559 |
| EFB90303.1 | EFB90302.1 | HMPREF7215_1215 | HMPREF7215_1214 | Hydrolase, carbon-nitrogen family; Identified by match to protein family HMM PF00795. | Demethylmenaquinone methyltransferase; Identified by match to protein family HMM PF03737. | 0.773 |
| EFB90303.1 | EFB90304.1 | HMPREF7215_1215 | HMPREF7215_1216 | Hydrolase, carbon-nitrogen family; Identified by match to protein family HMM PF00795. | Creatininase; Identified by match to protein family HMM PF02633. | 0.642 |
| EFB90303.1 | EFB90305.1 | HMPREF7215_1215 | HMPREF7215_1217 | Hydrolase, carbon-nitrogen family; Identified by match to protein family HMM PF00795. | Hypothetical protein; Identified by glimmer; putative. | 0.642 |
| EFB90303.1 | EFB90306.1 | HMPREF7215_1215 | HMPREF7215_1218 | Hydrolase, carbon-nitrogen family; Identified by match to protein family HMM PF00795. | Glycine dehydrogenase subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.454 |
| EFB90303.1 | EFB90307.1 | HMPREF7215_1215 | HMPREF7215_1219 | Hydrolase, carbon-nitrogen family; Identified by match to protein family HMM PF00795. | Putative glycine dehydrogenase subunit 2. | 0.454 |
| EFB90304.1 | EFB90301.1 | HMPREF7215_1216 | HMPREF7215_1213 | Creatininase; Identified by match to protein family HMM PF02633. | ABC transporter, substrate-binding protein, family 5; Identified by match to protein family HMM PF00496. | 0.472 |
| EFB90304.1 | EFB90302.1 | HMPREF7215_1216 | HMPREF7215_1214 | Creatininase; Identified by match to protein family HMM PF02633. | Demethylmenaquinone methyltransferase; Identified by match to protein family HMM PF03737. | 0.642 |
| EFB90304.1 | EFB90303.1 | HMPREF7215_1216 | HMPREF7215_1215 | Creatininase; Identified by match to protein family HMM PF02633. | Hydrolase, carbon-nitrogen family; Identified by match to protein family HMM PF00795. | 0.642 |
| EFB90304.1 | EFB90305.1 | HMPREF7215_1216 | HMPREF7215_1217 | Creatininase; Identified by match to protein family HMM PF02633. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
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