Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFB89522.1 | EFB89937.1 | HMPREF7215_0015 | HMPREF7215_1603 | Hypothetical protein; Identified by glimmer; putative. | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662. | 0.472 |
| EFB89522.1 | EFB90159.1 | HMPREF7215_0015 | HMPREF7215_0883 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.775 |
| EFB89552.1 | EFB89937.1 | HMPREF7215_1995 | HMPREF7215_1603 | Hypothetical protein. | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662. | 0.474 |
| EFB89791.1 | EFB89792.1 | HMPREF7215_2606 | HMPREF7215_2607 | Arylsulfatase; Identified by match to protein family HMM PF00884. | Hypothetical protein. | 0.640 |
| EFB89791.1 | EFB89937.1 | HMPREF7215_2606 | HMPREF7215_1603 | Arylsulfatase; Identified by match to protein family HMM PF00884. | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662. | 0.629 |
| EFB89792.1 | EFB89791.1 | HMPREF7215_2607 | HMPREF7215_2606 | Hypothetical protein. | Arylsulfatase; Identified by match to protein family HMM PF00884. | 0.640 |
| EFB89792.1 | EFB89937.1 | HMPREF7215_2607 | HMPREF7215_1603 | Hypothetical protein. | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662. | 0.433 |
| EFB89937.1 | EFB89522.1 | HMPREF7215_1603 | HMPREF7215_0015 | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662. | Hypothetical protein; Identified by glimmer; putative. | 0.472 |
| EFB89937.1 | EFB89552.1 | HMPREF7215_1603 | HMPREF7215_1995 | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662. | Hypothetical protein. | 0.474 |
| EFB89937.1 | EFB89791.1 | HMPREF7215_1603 | HMPREF7215_2606 | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662. | Arylsulfatase; Identified by match to protein family HMM PF00884. | 0.629 |
| EFB89937.1 | EFB89792.1 | HMPREF7215_1603 | HMPREF7215_2607 | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662. | Hypothetical protein. | 0.433 |
| EFB89937.1 | EFB90097.1 | HMPREF7215_1603 | HMPREF7215_1818 | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662. | Identified by match to protein family HMM PF05684. | 0.481 |
| EFB89937.1 | EFB90159.1 | HMPREF7215_1603 | HMPREF7215_0883 | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662. | Hypothetical protein; Identified by glimmer; putative. | 0.517 |
| EFB89937.1 | EFB90523.1 | HMPREF7215_1603 | HMPREF7215_1854 | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662. | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.473 |
| EFB89937.1 | EFB91136.1 | HMPREF7215_1603 | HMPREF7215_1604 | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662. | Arylsulfatase; Identified by match to protein family HMM PF00884. | 0.641 |
| EFB89937.1 | EFB91436.1 | HMPREF7215_1603 | HMPREF7215_1521 | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662. | Dicarboxylate carrier MatC domain protein; Identified by match to protein family HMM PF03600; match to protein family HMM PF07158. | 0.642 |
| EFB89937.1 | EFB91921.1 | HMPREF7215_1603 | HMPREF7215_1397 | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662. | Cupin domain protein; Identified by match to protein family HMM PF07883. | 0.682 |
| EFB90097.1 | EFB89937.1 | HMPREF7215_1818 | HMPREF7215_1603 | Identified by match to protein family HMM PF05684. | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662. | 0.481 |
| EFB90159.1 | EFB89522.1 | HMPREF7215_0883 | HMPREF7215_0015 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.775 |
| EFB90159.1 | EFB89937.1 | HMPREF7215_0883 | HMPREF7215_1603 | Hypothetical protein; Identified by glimmer; putative. | Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662. | 0.517 |
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