STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB91641.1Hypothetical protein. (144 aa)    
Predicted Functional Partners:
EFB91640.1
Identified by match to protein family HMM PF01970.
       0.741
EFB91642.1
Identified by match to protein family HMM PF03401.
       0.565
EFB91639.1
Demethylmenaquinone methyltransferase; Identified by match to protein family HMM PF03737.
       0.554
EFB91638.1
Citrate transporter; Identified by match to protein family HMM PF00939; match to protein family HMM PF03600; match to protein family HMM PF06808.
       0.487
EFB91643.1
Phosphogluconate dehydrogenase (decarboxylating), NAD binding domain protein; Identified by match to protein family HMM PF03446.
       0.424
Your Current Organism:
Pyramidobacter piscolens
NCBI taxonomy Id: 352165
Other names: P. piscolens W5455, Pyramidobacter piscolens W5455, Pyramidobacter piscolens str. W5455, Pyramidobacter piscolens strain W5455, Synergistetes bacterium W5455
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.