STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB91646.1Hypothetical protein. (231 aa)    
Predicted Functional Partners:
EFB90009.1
Identified by match to protein family HMM PF03781; 2.7.11.1.
      0.858
EFB91645.1
Hypothetical protein.
       0.774
EFB91505.1
Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
 
     0.661
EFB91647.1
Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456.
       0.648
EFB91648.1
Identified by match to protein family HMM PF07009.
       0.648
EFB91649.1
ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.648
EFB90450.1
Hypothetical protein.
     0.609
EFB90020.1
Hypothetical protein.
     0.562
EFB90633.1
Identified by match to protein family HMM PF07556.
  
     0.464
EFB90634.1
Hypothetical protein; Identified by glimmer; putative.
  
     0.442
Your Current Organism:
Pyramidobacter piscolens
NCBI taxonomy Id: 352165
Other names: P. piscolens W5455, Pyramidobacter piscolens W5455, Pyramidobacter piscolens str. W5455, Pyramidobacter piscolens strain W5455, Synergistetes bacterium W5455
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.