Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFB90099.1 | EFB90455.1 | HMPREF7215_1820 | HMPREF7215_2091 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212. | Dehydrogenase, FMN-dependent; Identified by match to protein family HMM PF01070. | 0.441 |
| EFB90099.1 | EFB91512.1 | HMPREF7215_1820 | HMPREF7215_1480 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212. | Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01817. | 0.824 |
| EFB90099.1 | EFB91605.1 | HMPREF7215_1820 | HMPREF7215_2307 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212. | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | 0.810 |
| EFB90099.1 | EFB91980.1 | HMPREF7215_1820 | HMPREF7215_0437 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212. | Dinuclear metal center protein, YbgI family; Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486. | 0.404 |
| EFB90455.1 | EFB90099.1 | HMPREF7215_2091 | HMPREF7215_1820 | Dehydrogenase, FMN-dependent; Identified by match to protein family HMM PF01070. | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212. | 0.441 |
| EFB90455.1 | EFB91605.1 | HMPREF7215_2091 | HMPREF7215_2307 | Dehydrogenase, FMN-dependent; Identified by match to protein family HMM PF01070. | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | 0.444 |
| EFB91512.1 | EFB90099.1 | HMPREF7215_1480 | HMPREF7215_1820 | Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01817. | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212. | 0.824 |
| EFB91512.1 | EFB91605.1 | HMPREF7215_1480 | HMPREF7215_2307 | Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01817. | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | 0.824 |
| EFB91604.1 | EFB91605.1 | HMPREF7215_2306 | HMPREF7215_2307 | Hypothetical protein. | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | 0.529 |
| EFB91604.1 | EFB91606.1 | HMPREF7215_2306 | HMPREF7215_2308 | Hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.405 |
| EFB91604.1 | EFB91607.1 | HMPREF7215_2306 | HMPREF7215_2309 | Hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.405 |
| EFB91605.1 | EFB90099.1 | HMPREF7215_2307 | HMPREF7215_1820 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212. | 0.810 |
| EFB91605.1 | EFB90455.1 | HMPREF7215_2307 | HMPREF7215_2091 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Dehydrogenase, FMN-dependent; Identified by match to protein family HMM PF01070. | 0.444 |
| EFB91605.1 | EFB91512.1 | HMPREF7215_2307 | HMPREF7215_1480 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01817. | 0.824 |
| EFB91605.1 | EFB91604.1 | HMPREF7215_2307 | HMPREF7215_2306 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Hypothetical protein. | 0.529 |
| EFB91605.1 | EFB91606.1 | HMPREF7215_2307 | HMPREF7215_2308 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Hypothetical protein; Identified by glimmer; putative. | 0.572 |
| EFB91605.1 | EFB91607.1 | HMPREF7215_2307 | HMPREF7215_2309 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Hypothetical protein; Identified by glimmer; putative. | 0.572 |
| EFB91605.1 | EFB91608.1 | HMPREF7215_2307 | HMPREF7215_2310 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Hypothetical protein; Identified by glimmer; putative. | 0.502 |
| EFB91605.1 | EFB91980.1 | HMPREF7215_2307 | HMPREF7215_0437 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Dinuclear metal center protein, YbgI family; Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486. | 0.404 |
| EFB91605.1 | hydE | HMPREF7215_2307 | HMPREF7215_2311 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Iron-only hydrogenase maturation rSAM protein HydE; Identified by match to protein family HMM PF04055. | 0.507 |
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