STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB89801.1CBS domain protein; Identified by match to protein family HMM PF00571. (155 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
  
 0.966
EFB91420.1
5'-nucleotidase, C-terminal domain protein; Identified by match to protein family HMM PF00149; match to protein family HMM PF02872; Belongs to the 5'-nucleotidase family.
    
  0.897
EFB89804.1
ATP synthase subunit C; Identified by match to protein family HMM PF00137.
 
  
  0.889
EFB89803.1
Putative V-type sodium ATPase, I subunit; Identified by glimmer; putative; Belongs to the V-ATPase 116 kDa subunit family.
  
 
  0.874
EFB89806.1
Putative ATP synthase, subunit C.
  
 
  0.856
EFB89800.1
Glycosyltransferase, WecB/TagA/CpsF family; Identified by match to protein family HMM PF03808; match to protein family HMM TIGR00696; Belongs to the glycosyltransferase 26 family.
 
     0.843
EFB89805.1
Hypothetical protein; Identified by glimmer; putative.
  
 
  0.833
EFB91237.1
Sugar isomerase, KpsF/GutQ family; Identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393; Belongs to the SIS family. GutQ/KpsF subfamily.
    
 0.799
EFB90221.1
Putative 5-methyltetrahydrofolate--homocysteine methyltransferase; Identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607.
  
 
 0.798
EFB89802.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
Your Current Organism:
Pyramidobacter piscolens
NCBI taxonomy Id: 352165
Other names: P. piscolens W5455, Pyramidobacter piscolens W5455, Pyramidobacter piscolens str. W5455, Pyramidobacter piscolens strain W5455, Synergistetes bacterium W5455
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.