STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgd5_3270RNA recognition motif (RRM)-containing protein. (202 aa)    
Predicted Functional Partners:
cgd2_3970
RRM domain containing protein.
  
  
 
0.908
cgd5_700
Musashi. RRM domain containing protein, splicing related.
  
  
 
0.905
cgd3_1230
SPAC14C4.06c-like PWI+4CCCH domains.
    
 
 0.771
cgd1_1310
Cleavage stimulation factor subunit 2 that has a CSF1 like RRM domain.
  
 
 0.726
cgd8_3440
Importin beta like ARM repeat alpha superhelix.
   
 
 0.661
cgd8_3370
Splicing factor SRP40 like 2x RRM domains.
   
 0.608
cgd8_3960
WD_REPEATS_REGION domain-containing protein.
 
 
 
 0.577
cgd6_990
RRM domain containing protein.
   
 0.558
cgd1_3530
Gbp1/Gbp2p-like, putative single stranded G-strand telomeric DNA-binding protein.
  
 
 0.554
cgd7_940
Splicing factor RRM domain containing protein T22E16.120 SC35-like splicing factor.
  
 
 0.538
Your Current Organism:
Cryptosporidium parvum
NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.