STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgd4_200Large low complexity coiled coil protein with large repeat region. (1833 aa)    
Predicted Functional Partners:
Tra1p-like
Tra1p-like C-terminal FAT domain plus phoshoinositide 3-kinase domain very large protein; Belongs to the PI3/PI4-kinase family.
    
 0.577
cgd1_2600
Transcription factor TAF5p, TBP associated protein involved in transcription.
    
 0.534
cgd7_4450
Elongation factor EF1-gamma (Glutathione S-transferase family).
      
 0.522
cgd1_1900
Fur1p like uracil phosphoribosyltransferase.
    
 0.506
cgd8_2810
Uridine kinase; Belongs to the uridine kinase family.
    
 0.506
cgd3_3190
GCN5 like acetylase + bromodomain.
    
 0.491
cgd8_700
Predicted secreted protein, signal peptide with several threonines, possible mucin.
    
 0.491
cgd8_680
Large low complexity protein with repeats.
   
 0.471
cgd8_660
Large low complexity protein.
   
 0.471
cgd4_3670
Putative low complexity protein.
   
 0.471
Your Current Organism:
Cryptosporidium parvum
NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II
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