STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgd4_2220Putative double-stranded DNA-binding domain, small conserved protein. (130 aa)    
Predicted Functional Partners:
cgd1_850
40S ribosomal protein S19.
  
    0.780
cgd3_1300
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
  
    0.780
cgd8_2870
60S ribosomal protein L10A.
  
  
 0.762
cgd4_1660
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
    0.755
cgd8_3450
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
    0.746
cgd6_4320
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
    0.744
cgd3_3890
60S ribosomal protein L30, pelota RNA binding domain containing protein.
   
    0.739
cgd6_570
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
  
 0.737
cgd3_830
60S ribosomal protein L35.
   
    0.732
cgd2_2870
40S ribosomal protein S28, no good start Met.
  
    0.731
Your Current Organism:
Cryptosporidium parvum
NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.