STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgd5_1690Cactin-like protein. (548 aa)    
Predicted Functional Partners:
cgd1_1800
Transducin / WD-40 repeat protein family.
   
 
 0.748
cgd8_2960
NIC+MI domains containing protein. nucampholin/yeast Cwc22p like protein involved in mRNA splicing.
   
 
  0.708
cgd3_2230
Nkap_C domain-containing protein.
   
 
  0.635
cgd7_4600
Abstrakt protein SF II helicase + Znknuckle C2HC (PA).
     
 0.621
cgd6_1410
Pre-mRNA splicing factor ATP-dependent RNA helicase, putative.
   
 
 0.600
cgd8_3340
PWI domain containing protein that is typically seen in spliceosomal proteins.
     
 0.559
cgd7_1750
Step II splicing factor SLU7, putative.
     
 0.546
cgd7_1180
Cir_N domain-containing protein.
     
 0.546
cgd3_3690
U5 snRNP 100 kD protein, putative; Belongs to the DEAD box helicase family.
   
 
 0.451
cgd8_2520
Mtr4p like SKI family SFII helicase.
     
 0.429
Your Current Organism:
Cryptosporidium parvum
NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.