STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgd5_97060S ribosomal protein L13A. (204 aa)    
Predicted Functional Partners:
cgd7_4760
Ribosomal protein S4, putative.
  
 0.999
cgd6_1390
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.999
cgd6_3190
60S ribosomal protein-like, putative.
  
 0.999
cgd8_1840
40S ribosomal subunit protein S9, putative.
  
 0.999
cgd2_1870
Guanine nucleotide-binding protein, putative.
   
 
 0.999
cgd2_2990
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.999
cgd5_1580
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.999
cgd2_120
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.999
cgd2_350
60S ribosomal protein L39.
  
 0.999
cgd2_280
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.999
Your Current Organism:
Cryptosporidium parvum
NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.