STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgd1_2660N-terminal acetyltransferase complex ard1. (180 aa)    
Predicted Functional Partners:
cgd7_920
Protein with 2 possible TPR domains, possible n-terminal acetyltransferase.
   
 
 0.771
cgd8_2010
Span like RimI family protein amino acetyltransferase.
   
  
 0.755
cgd3_1900
annotation not available
      
 0.750
cgd6_1800
Acetyltransferase, GNAT family.
      
 0.750
cgd6_1200
Diphthine synthase diphthamide biosynthesis methyltransferase.
      
 0.624
cgd1_2700
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
   
  
 0.555
cgd7_3690
Crooked neck protein HAT repeats.
      
 0.527
cgd3_830
60S ribosomal protein L35.
      
 0.441
cgd2_2480
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
   
  
 0.437
cgd3_1060
U1 like C2H2 zinc finger.
      
 0.433
Your Current Organism:
Cryptosporidium parvum
NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II
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