STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgd2_730RNA polymerase III transcription factor (TF)IIIC subunit tau/Tfc1p. (407 aa)    
Predicted Functional Partners:
cgd5_1280
Tfc4p like TFIIIC subunit TPR repeat containing basal transcription factor.
   
 0.999
cgd5_3540
Cyclin domain protein.
    
 0.943
cgd4_1270
Transcription factor TFIIIB, SANT domain.
    
 0.895
cgd6_3290
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.804
cgd4_110
Uncharacterized protein.
   
 0.802
cgd6_4580
DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.
   
 
 0.778
cgd8_1460
Sex-lethal interacting like.
     
 0.775
cgd7_510
RNA polymerase III subunit C11.
    
 0.735
cgd8_210
Transcription factor TFIID, TBP.
    
 0.732
cgd8_2030
TATA-box factor binding protein.
    
 0.732
Your Current Organism:
Cryptosporidium parvum
NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.