STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgd3_2060Ring domain protein. (493 aa)    
Predicted Functional Partners:
cgd7_2280
60S ribosomal protein L40.
    
 0.724
cgd5_2550
Polyubiquitin with 3 Ub domains.
   
 0.704
cgd4_3080
Ribosomal protein S27a, ubiquitin plus zincribbon, UB13p.
    
 0.660
cgd7_2800
Ubiquitin-conjugating enzyme E2, putative; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.593
cgd3_2220
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.593
cgd4_570
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.593
cgd4_210
Ubc1p like ubiquitin-conjugating enzyme E2 fused to a UBA domain (UBC+UBA); Belongs to the ubiquitin-conjugating enzyme family.
   
 0.590
cgd2_3660
Serine protease, subtilase family, signal peptide, putative.
   
 0.583
cgd6_4840
Serine protease, subtilase family, signal peptide; Belongs to the peptidase S8 family.
   
 0.583
cgd8_580
Ubiquitin-conjugating enzyme E2, putative.
   
 0.531
Your Current Organism:
Cryptosporidium parvum
NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.