STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgd8_4770CPSF_A domain-containing protein. (1965 aa)    
Predicted Functional Partners:
cgd8_460
Cleavage and polyadenylation specifity factor protein, CPSF metallobeta-lactamase.
   
 0.999
cgd5_510
Symplekin_C domain-containing protein.
    
 0.999
cgd6_1730
Cleavage and polyadenylation specificity factor 4-like 3x Zn C3H1 domains.
   
 0.999
cgd6_580
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.999
cgd6_400
Pre-mRNA polyadenylation factor.
   
 0.999
cgd7_4140
WD40 domain protein.
   
 0.999
Pap1p
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.998
cgd8_3720
D441/Mpe1p like protein with a zinc knuckle (C2HC) and PhD Zn finger domain.
    
 
 0.997
cgd1_3160
mRNA 3' end processing protein RNA14, HAT repeats.
   
 0.996
cgd8_3960
WD_REPEATS_REGION domain-containing protein.
    
 
 0.992
Your Current Organism:
Cryptosporidium parvum
NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.