cgd8_2250 protein (Cryptosporidium parvum) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

cgd8_2250

Rat1 Kar1/Rat1 like 5'-3' exonuclease. (1350 aa)

Predicted Functional Partners:

cgd6_2080

0.979

cgd8_2520

0.819

cgd3_280

0.811

cgd5_100

0.777

cgd7_2710

0.750

cgd6_1230

0.728

Pap1p

0.726

cgd8_460

0.723

cgd4_1480

0.712

cgd1_3070

0.692

Your Current Organism:

Cryptosporidium parvum

NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Pap1p	cgd3_280	Q5CQF4	Q5CPF4	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	mRNA translation inhibitor SKI2 SFII helicase, DEXDc+HELICc.	0.610
Pap1p	cgd5_100	Q5CQF4	Q5CS61	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	RRPp/PMC2 like exosome 3'-5' exoribonuclease subunit with an RNAseD domain and an HRDc domain.	0.762
Pap1p	cgd6_2080	Q5CQF4	Q5CX86	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Kem1p-like 5'-3' exonuclease.	0.677
Pap1p	cgd8_2250	Q5CQF4	Q5CVZ1	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Rat1 Kar1/Rat1 like 5'-3' exonuclease.	0.726
Pap1p	cgd8_2520	Q5CQF4	Q5CVW7	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Mtr4p like SKI family SFII helicase.	0.811
Pap1p	cgd8_460	Q5CQF4	Q5CPX2	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Cleavage and polyadenylation specifity factor protein, CPSF metallobeta-lactamase.	0.997
cgd1_3070	cgd3_280	Q5CSE4	Q5CPF4	U3 small nucleolar RNA-associated protein 20.	mRNA translation inhibitor SKI2 SFII helicase, DEXDc+HELICc.	0.729
cgd1_3070	cgd4_1480	Q5CSE4	Q5CQA4	U3 small nucleolar RNA-associated protein 20.	BMS1 like GTpase involved in ribosome biogenesis.	0.999
cgd1_3070	cgd5_100	Q5CSE4	Q5CS61	U3 small nucleolar RNA-associated protein 20.	RRPp/PMC2 like exosome 3'-5' exoribonuclease subunit with an RNAseD domain and an HRDc domain.	0.970
cgd1_3070	cgd6_1230	Q5CSE4	Q5CXG0	U3 small nucleolar RNA-associated protein 20.	GTpase Grc3p-like Pre-mRNA cleavage complex.	0.633
cgd1_3070	cgd8_2250	Q5CSE4	Q5CVZ1	U3 small nucleolar RNA-associated protein 20.	Rat1 Kar1/Rat1 like 5'-3' exonuclease.	0.692
cgd1_3070	cgd8_2520	Q5CSE4	Q5CVW7	U3 small nucleolar RNA-associated protein 20.	Mtr4p like SKI family SFII helicase.	0.907
cgd3_280	Pap1p	Q5CPF4	Q5CQF4	mRNA translation inhibitor SKI2 SFII helicase, DEXDc+HELICc.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.610
cgd3_280	cgd1_3070	Q5CPF4	Q5CSE4	mRNA translation inhibitor SKI2 SFII helicase, DEXDc+HELICc.	U3 small nucleolar RNA-associated protein 20.	0.729
cgd3_280	cgd4_1480	Q5CPF4	Q5CQA4	mRNA translation inhibitor SKI2 SFII helicase, DEXDc+HELICc.	BMS1 like GTpase involved in ribosome biogenesis.	0.783
cgd3_280	cgd5_100	Q5CPF4	Q5CS61	mRNA translation inhibitor SKI2 SFII helicase, DEXDc+HELICc.	RRPp/PMC2 like exosome 3'-5' exoribonuclease subunit with an RNAseD domain and an HRDc domain.	0.953
cgd3_280	cgd6_1230	Q5CPF4	Q5CXG0	mRNA translation inhibitor SKI2 SFII helicase, DEXDc+HELICc.	GTpase Grc3p-like Pre-mRNA cleavage complex.	0.410
cgd3_280	cgd6_2080	Q5CPF4	Q5CX86	mRNA translation inhibitor SKI2 SFII helicase, DEXDc+HELICc.	Kem1p-like 5'-3' exonuclease.	0.930
cgd3_280	cgd7_2710	Q5CPF4	Q5CYD9	mRNA translation inhibitor SKI2 SFII helicase, DEXDc+HELICc.	Ataxin2 related nudix domain protein (RNA processing phosphatase/ATpase domain).	0.644
cgd3_280	cgd8_2250	Q5CPF4	Q5CVZ1	mRNA translation inhibitor SKI2 SFII helicase, DEXDc+HELICc.	Rat1 Kar1/Rat1 like 5'-3' exonuclease.	0.811