STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgd7_2810DNA/RNA-binding protein KIN17. (265 aa)    
Predicted Functional Partners:
cgd6_2830
Splicing factor 3a 66kD N-terminus C2H2 domain.
    
 
 0.865
cgd6_4670
Prp9p-like splicing factor 3a subunit 3 snRNP.
    
 
 0.838
cgd6_3490
RNA-binding protein, putative.
   
   0.783
cgd3_2570
Conserved protein.
    
 0.726
cgd8_4240
Possible spliceosome factor.
    
   0.726
cgd6_4750
Splicing factor 3B subunit1-like HEAT repeat containing protein.
    
   0.726
cgd7_5250
Methyltransfer with N-terminal ankyrin repeats.
    
 0.726
cgd4_1090
Uncharacterized protein.
   
   0.674
cgd3_1920
Possible PRP38 pre-mRNA splicing factor family member.
   
   0.674
cgd3_3880
Snu114p GTpase, U5 snRNP-specific protein, 116 kDa.
    
 
 0.630
Your Current Organism:
Cryptosporidium parvum
NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.