STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q4DJB2_TRYCCRibosomal RNA processing protein 41B, putative. (285 aa)    
Predicted Functional Partners:
Q4DUC2_TRYCC
Ribosomal RNA processing protein 40, putative.
  
 0.999
Q4DZV3_TRYCC
ATP-dependent DEAD/H RNA helicase, putative.
   
 0.998
Q4E4V1_TRYCC
Elongation factor 1-alpha (EF-1-alpha), putative.
    
 0.998
Q4CY77_TRYCC
Exosome-associated protein 1, putative.
  
 0.994
Q4DQP4_TRYCC
Exosome-associated protein 1, putative.
  
 0.994
Q4CUM5_TRYCC
Exosome complex exonuclease, putative.
   
 0.992
Q4DCG9_TRYCC
Exosome complex exonuclease, putative.
   
 0.992
Q4D2P8_TRYCC
Uncharacterized protein.
   
   0.991
Q4CR35_TRYCC
Exosome component CSL4, putative.
   
 0.990
Q4D355_TRYCC
Exosome-associated protein 2, putative.
   
 0.990
Your Current Organism:
Trypanosoma cruzi
NCBI taxonomy Id: 353153
Other names: T. cruzi strain CL Brener, Trypanosoma cruzi strain CL Brener
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.