STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA82578.1(R)-hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)    
Predicted Functional Partners:
ORA82220.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.975
ORA81051.1
3-hydroxyacyl-ACP dehydratase; Functions as a heterodimer along with HadB in fatty acid biosynthesis; fatty acid synthase type II; FAS-II; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0336 family.
 
 
0.975
ORA79208.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0336 family.
 
 
0.950
ORA81053.1
3-hydroxyacyl-ACP dehydratase; Functions as a heterodimer along with HadB in fatty acid biosynthesis; fatty acid synthase type II; FAS-II; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0336 family.
 
 
0.948
ORA70400.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.790
ORA75499.1
fatty-acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.768
ORA76722.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.756
ORA77251.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.751
ORA79190.1
Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.750
ORA72649.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.749
Your Current Organism:
Mycolicibacter kumamotonensis
NCBI taxonomy Id: 354243
Other names: CCUG 51961, DSM 45093, GTC 2729, JCM 13453, M. kumamotonensis, Mycobacterium kumamotoense, Mycobacterium kumamotonense, Mycobacterium kumamotonense Masaki et al. 2007, Mycolicibacter kumamotonensis (Masaki et al. 2007) Gupta et al. 2018, strain CST 7247
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