STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA82622.1LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)    
Predicted Functional Partners:
ORA82240.1
Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.813
ORA77871.1
Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.813
ORA75499.1
fatty-acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.804
ORA82710.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.766
ORA79906.1
enoyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.732
ORA77768.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.722
ORA77869.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.708
ORA82219.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.695
ORA82998.1
Coenzyme F420-0:L-glutamate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.685
ORA81006.1
LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.684
Your Current Organism:
Mycolicibacter kumamotonensis
NCBI taxonomy Id: 354243
Other names: CCUG 51961, DSM 45093, GTC 2729, JCM 13453, M. kumamotonensis, Mycobacterium kumamotoense, Mycobacterium kumamotonense, Mycobacterium kumamotonense Masaki et al. 2007, Mycolicibacter kumamotonensis (Masaki et al. 2007) Gupta et al. 2018, strain CST 7247
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