STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA80551.13-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (554 aa)    
Predicted Functional Partners:
ORA75838.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.986
ORA75864.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.981
ORA80550.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.947
ORA80616.1
6-phosphogluconate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.922
ORA75860.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.907
ORA80552.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.903
ORA81632.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.902
ORA82218.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.893
ORA79172.1
3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.890
ORA80553.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.889
Your Current Organism:
Mycolicibacter kumamotonensis
NCBI taxonomy Id: 354243
Other names: CCUG 51961, DSM 45093, GTC 2729, JCM 13453, M. kumamotonensis, Mycobacterium kumamotoense, Mycobacterium kumamotonense, Mycobacterium kumamotonense Masaki et al. 2007, Mycolicibacter kumamotonensis (Masaki et al. 2007) Gupta et al. 2018, strain CST 7247
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.