STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA79728.1DUF1275 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)    
Predicted Functional Partners:
ORA79727.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.837
ORA79725.1
RDD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.834
ORA79724.1
Mce protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.807
ORA79723.1
MCE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.798
ORA79720.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.793
ORA79726.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.793
ORA79722.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.781
ORA79717.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.730
ORA79718.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.730
ORA79765.1
MCE-family protein MCE1A; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.730
Your Current Organism:
Mycolicibacter kumamotonensis
NCBI taxonomy Id: 354243
Other names: CCUG 51961, DSM 45093, GTC 2729, JCM 13453, M. kumamotonensis, Mycobacterium kumamotoense, Mycobacterium kumamotonense, Mycobacterium kumamotonense Masaki et al. 2007, Mycolicibacter kumamotonensis (Masaki et al. 2007) Gupta et al. 2018, strain CST 7247
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.