Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEN08000.1 | SEN08028.1 | SAMN05660816_00137 | SAMN05660816_00138 | Alanine dehydrogenase. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.740 |
SEN08000.1 | SEN71002.1 | SAMN05660816_00137 | SAMN05660816_01297 | Alanine dehydrogenase. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.993 |
SEN08028.1 | SEN08000.1 | SAMN05660816_00138 | SAMN05660816_00137 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | Alanine dehydrogenase. | 0.740 |
SEN08028.1 | SEN08066.1 | SAMN05660816_00138 | SAMN05660816_00139 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | Cu+-exporting ATPase. | 0.602 |
SEN08028.1 | SEN08106.1 | SAMN05660816_00138 | SAMN05660816_00140 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | ATP-dependent DNA helicase RecQ. | 0.563 |
SEN08028.1 | SEN19718.1 | SAMN05660816_00138 | SAMN05660816_00422 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.998 |
SEN08028.1 | SEN71002.1 | SAMN05660816_00138 | SAMN05660816_01297 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.836 |
SEN08028.1 | SEP31800.1 | SAMN05660816_00138 | SAMN05660816_05265 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.886 |
SEN08028.1 | SEP49363.1 | SAMN05660816_00138 | SAMN05660816_06951 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | 0.886 |
SEN08028.1 | nnrD | SAMN05660816_00138 | SAMN05660816_04282 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...] | 0.763 |
SEN08028.1 | polA | SAMN05660816_00138 | SAMN05660816_00798 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.586 |
SEN08028.1 | tsaD | SAMN05660816_00138 | SAMN05660816_03447 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.988 |
SEN08066.1 | SEN08028.1 | SAMN05660816_00139 | SAMN05660816_00138 | Cu+-exporting ATPase. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.602 |
SEN08066.1 | SEN08106.1 | SAMN05660816_00139 | SAMN05660816_00140 | Cu+-exporting ATPase. | ATP-dependent DNA helicase RecQ. | 0.811 |
SEN08106.1 | SEN08028.1 | SAMN05660816_00140 | SAMN05660816_00138 | ATP-dependent DNA helicase RecQ. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.563 |
SEN08106.1 | SEN08066.1 | SAMN05660816_00140 | SAMN05660816_00139 | ATP-dependent DNA helicase RecQ. | Cu+-exporting ATPase. | 0.811 |
SEN08106.1 | SEP31800.1 | SAMN05660816_00140 | SAMN05660816_05265 | ATP-dependent DNA helicase RecQ. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.671 |
SEN08106.1 | SEP49363.1 | SAMN05660816_00140 | SAMN05660816_06951 | ATP-dependent DNA helicase RecQ. | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | 0.615 |
SEN08106.1 | polA | SAMN05660816_00140 | SAMN05660816_00798 | ATP-dependent DNA helicase RecQ. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.996 |
SEN19718.1 | SEN08028.1 | SAMN05660816_00422 | SAMN05660816_00138 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.998 |
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