STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN38307.1Subtilase family protein; Belongs to the peptidase S8 family. (394 aa)    
Predicted Functional Partners:
SEO80074.1
Por secretion system C-terminal sorting domain-containing protein.
 
 
 0.787
SEN38354.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
       0.570
SEN38383.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
       0.570
secY
Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.534
SEN38419.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
    0.513
SEP44166.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.457
SEN38275.1
NAD(P)H-dependent FMN reductase.
       0.452
SEN38242.1
Hypothetical protein.
       0.431
SEP31800.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.431
SEO31374.1
Ca2+-transporting ATPase.
  
 
 0.426
Your Current Organism:
Niastella yeongjuensis
NCBI taxonomy Id: 354355
Other names: DSM 17621, KACC 11466, N. yeongjuensis, Niastella yeongjuensis Weon et al. 2006, strain GR20-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.