STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN39586.1PAS domain S-box-containing protein. (1017 aa)    
Predicted Functional Partners:
SEN29600.1
PAS domain S-box-containing protein.
 
0.999
SEN36182.1
Signal transduction histidine kinase.
 
0.999
SEN56590.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
0.999
SEN61961.1
PAS domain S-box-containing protein.
 
0.999
SEN83501.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
  
 0.999
SEN83537.1
PAS domain S-box-containing protein.
 
0.999
SEN86341.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
0.999
SEO07914.1
Signal transduction histidine kinase.
 
0.999
SEO11430.1
AraC-type DNA-binding protein.
  
 0.999
SEO14184.1
Two component regulator propeller.
 
0.999
Your Current Organism:
Niastella yeongjuensis
NCBI taxonomy Id: 354355
Other names: DSM 17621, KACC 11466, N. yeongjuensis, Niastella yeongjuensis Weon et al. 2006, strain GR20-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.