STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN40220.1Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family. (486 aa)    
Predicted Functional Partners:
SEN40185.1
Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
 
  
 
0.949
SEP12613.1
Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
  
  
 
0.828
SEN40146.1
Starch-binding associating with outer membrane.
 
     0.654
SEO65391.1
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
  
  0.639
SEN40085.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.586
SEN79015.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
  
  0.584
SEN40113.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.570
SEO31017.1
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
  
  0.534
SEP16868.1
Beta-galactosidase.
  
 0.532
SEO59444.1
Glycosyl hydrolases family 2.
  
  
  0.516
Your Current Organism:
Niastella yeongjuensis
NCBI taxonomy Id: 354355
Other names: DSM 17621, KACC 11466, N. yeongjuensis, Niastella yeongjuensis Weon et al. 2006, strain GR20-13
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.